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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs77028352 chr20:30254548 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs77363559 chr20:30398907 T/C 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs77547431 chr20:30424374 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs77802901 chr20:30229220 C/G 6.36E-5 67 27.92 8.25 7.6 KM Plot
UVM rs78633027 chr20:30370694 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs78638364 chr20:30361587 G/A 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs78856759 chr20:30377176 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs79052331 chr20:30379933 C/T 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs79270944 chr20:30410895 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs7957044 chr12:132608889 T/C 3.82E-7 66 31.83 23.63 0.73 KM Plot
UVM rs7959406 chr12:9807117 A/G 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7959726 chr12:9807331 A/G 0.000125 67 27.88 21.8 7.6 KM Plot
UVM rs7961262 chr12:9804226 C/G 0.000112 67 27.62 21.8 7.6 KM Plot
UVM rs7961416 chr12:9804413 C/G 0.000112 67 7.6 21.8 27.62 KM Plot
UVM rs79616906 chr20:30254790 G/A 6.07E-5 67 27.9 14.23 7.6 KM Plot